pymol-mcp

Headless PyMOL for molecular visualization, GROMACS/LAMMPS trajectories and clathrate-hydrate cage analysis, including H-bond networks and order parameters.

#3609 by GitHub starsChecked 2026-11-02

What it connects

Headless PyMOL for molecular visualization, GROMACS/LAMMPS trajectories and clathrate-hydrate cage analysis, including H-bond networks and order parameters.

Registry listing — description sourced from the publisher's entry in an awesome-list. Setup, compatibility and requirements are not verified; see the repository.

Source: https://github.com/wjgoarxiv/pymol-mcp · ★ 1 on the source repo

Setup instructions and compatibility are compiled from publisher docs and community reports, not hands-on testing, unless a step is marked Tested. Check the source before relying on a setup.